Bioplex interactome
http://gpmdb.thegpm.org/protein/accession/ENSP00000222005 WebJul 16, 2015 · The BioPlex Network: A Systematic Exploration of the Human Interactome Highlights • 2,594 AP-MS experiments provide 23,744 interactions involving 7,668 proteins • The network subdivides into …
Bioplex interactome
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Web1. BioGRID. 3133147. PLK1 BICD2. Affinity Capture-MS. Affinity Capture-MS. An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. Pinder A (2015) Low.
WebBioPlex Explorer. To enable search and download of the BioPlex Interactome datasets, we developed the web application - BioPlex Explorer. With the Explorer, users can search for their favorite protein within the BioPlex interactome and investigate subnetworks, network communities, or cell-line specific interactions. Explore! WebNotes: Each of the diagrams indicates the patterns of peptides observed from individual proteomics measurements. This type of pattern experimentally determined peptides is commonly referred to as the "protein sequence coverage".
WebS. Gygi, Y. Rochon, B. Franza, 1999, Molecular and Cellular Biology. The impact of microRNAs on protein output WebDOWNLOADS Most Popular Insights An evolving model The lessons of Ecosystem 1.0 Lesson 1: Go deep or go home Lesson 2: Move strategically, not conveniently Lesson 3: …
WebMay 6, 2024 · In contrast, BioPlex-specific interactions couple well-studied and unknown proteins alike, reflecting the sensitive, unbiased nature of our approach. More fundamentally, creating two contrasting networks …
WebJun 4, 2010 · NX_P38646 - HSPA9 - Stress-70 protein, mitochondrial - Function. Chaperone protein which plays an important role in mitochondrial iron-sulfur cluster (ISC) biogenesis. Interacts with and stabilizes ISC cluster assembly proteins FXN, NFU1, NFS1 and ISCU (PubMed:26702583). Regulates erythropoiesis via stabilization of ISC assembly … land rover safety trainersWeb0.9526. BioGRID. 1187410. HLA-C FAM3C. Affinity Capture-MS. Affinity Capture-MS. An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. Huttlin EL (2024) High. hemerocallis condillaWebAffinity Capture-MS. An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods. Huttlin EL (2024/pre-pub) High. 0.8013. BioGRID. 3255625. PDCD1 FAM3C. Affinity Capture-MS. hemerocallis common nameWebWe also consider the human reference interactome (HuRI) generated by Luck et al. 94, specifically, we use the high throughput investigation (HI) union, a combination of HuRI and several related ... hemerocallis cosmic struggleWebFeb 1, 2024 · The interactome analyses of PLD4 and PLD5 were not included in BioPlex, although PLD5 was revealed as a prey protein in some interactome studies there (supplemental Fig. S1 B and supplemental Table S4). Moreover, we identified additional high-confidence interactions with PLD proteins that were not reported in BioPlex, further … hemerocallis cranberry baby daylilyWebJan 19, 2024 · Thousands of interactions assemble proteins into modules that impart spatial and functional organization to the cellular proteome. Through affinity-purification mass spectrometry, we have created two proteome-scale, cell-line-specific interaction networks. The first, BioPlex 3.0, results from affinity purification of 10,128 human proteins – half … land rover salt lake city downtownWebJan 5, 2024 · BioPlex is a large-scale interactome data set based on AP-MS of baits from the human ORFeome. The latest BioPlex data set release (BioPlex 2.0) contains 56 … land rover sales scotland